# change to cmiss root dir
cd $CMISS_ROOT
# checkout cm module
cvs co cm

$ checkout perl interpreter
cvs co perl_interpreter

# copy over libraries for perl interpreter
mkdir perl_interpreter/lib
scp -r $USERNAME@bioeng22:/hpc/cmiss/perl_interpreter/lib/i686-linux/ perl_interpreter/lib

#  ln -s 5.6.1/i686-linux-dynamic/libperlinterpreter-debug.a liperlinterpreter-debug.a
#  ln -s 5.6.1/i686-linux-dynamic/libperlinterpreter.a libperlinterpreter.a

# check out cellml
cvs co cellml

# copy over libraries for cell ml
mkdir cellml/lib
scp -r $USERNAME@bioeng22:/hpc/cmiss/cellml/lib/i686-linux/ cellml/lib


#  /usr/lib/gcc-lib/i586-mandrake-linux-gnu/3.3.2/listdc++.a

# Check out the linear solvers directory:
cvs co linear_solvers

# get linear solver libraries
scp -r $USERNAME@bioeng22:/hpc/cmiss/linear_solvers/lib/ linear_solvers

# check out cmiss_perl and cmiss_utils
cvs co cmiss_perl
cvs co cmiss_utils

# make
cd $CMISS_ROOT/cm
make