Incompleted Steps

Steps that still need work

1. Cell model

   • Cellml.
     • Andre may have an integrator we can use?
     • Jagir has an adaptation of Andrew's GSL-based integrator.
     • Requirements for CellML Libmesh integration

2. Bidomain Class (See "first attempt":http://www.cmiss.org/openCMISS/wiki/libMesh%20Bidomain%20Class/view.)

   • Contains ?????
   • Is ?????

3. Visualization

   • Export to cmgui

4. Adaptions to CMISS examples framework.

   • Store separate times for build and run phases.
   • Automatically update, build, and test LibMesh library.

5. Evaluate FieldML concepts

6. Material properties

   • Develop grand strategy for how to represent materials in libMesh and more importantly how to read in data from CM examples into libMesh.
   • How are we going to interpolate fibre angles?
     • Either from coarse elements interpolated in libmesh,
       • would require high order elements in libMesh.
     • Or read in fine elements from cm/cmgui output?
       • Probably faster to code but uses more memory.
       • Seems a good place to start.

8. Hermite geometry
9. Cleavage planes
10. Distribute the mesh.

• Not sure if/when this will be needed.